Sphingobacterium siyangense strain T12B17

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium siyangense strain T12B17 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is classified as mesophilic, with an optimal growth temperature of 32°C, indicating it thrives in moderate temperature conditions. Notably, S. siyangense strain T12B17 possesses a single replicon and does not form spores. The aerobic nature of Sphingobacterium siyangense suggests that it requires oxygen for growth and metabolism, which aligns with the characteristics of many bacteria within the Sphingobacterium genus. Its non-motile status may influence its ecological interactions, as mobility can impact nutrient acquisition and colonization in various environments. The accessions for this strain are recorded under MCAQ00000000.1, providing a reference for further studies and potential applications in microbiological research. Given its specific traits, Sphingobacterium siyangense strain T12B17 may play a role in biogeochemical cycling in its natural habitat, contributing to the breakdown of organic materials in aerobic conditions. Understanding the ecological significance of such strains is essential for appreciating their potential applications in biotechnology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium siyangense
Strainstrain T12B17

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium siyangense strain T12B17
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium siyangense strain T12B17 T12B17_scaffold9, whole

Gene Summary

Adenine Count

2028750 bp

Thymine Count

2036777 bp

Guanine Count

1361079 bp

Cytosine Count

1321059 bp

Genome Length

6747805 bp

Protein-coding Genes

5484 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
monooxygenaseBCY89_25805Not AvailableNegative2139917 - 214110143621.3
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseBCY89_25810Not AvailableNegative2141103 - 214188229570.7
4-hydroxythreonine-4-phosphate dehydrogenase pdxaBCY89_25815Not AvailablePositive2141964 - 214301938737.6
trna nucleotidyltransferaseBCY89_25820Not AvailablePositive2143075 - 214450854734.6
hypothetical proteinBCY89_25825Not AvailablePositive2144554 - 214514723118.0
trna (adenosine(37)-n6)-dimethylallyltransferase miaaBCY89_25830Not AvailablePositive2145194 - 214611434740.8
branched chain amino acid aminotransferaseBCY89_25835Not AvailableNegative2146269 - 214733939973.2
hypothetical proteinBCY89_25840Not AvailableNegative2148015 - 214952958658.6
lps export abc transporter atp-binding proteinBCY89_25845Not AvailableNegative2149552 - 215028627701.7
single-stranded-dna-specific exonuclease recjBCY89_25850Not AvailableNegative2150442 - 215214263535.4

Displaying genes 1781 – 1790 of 5568 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.