Salinicola sp. MIT1003

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Salinicola

Description

Salinicola sp. MIT1003 is a unique microbial species characterized by possessing a single replicon, indicating a streamlined genomic organization. The genomic data for this organism is available under the accession MCAP00000000.1. This single replicon structure suggests a potential adaptation to its environmental niche, likely contributing to its efficiency in replication and metabolic processes. Salinicola sp. is notable for its ecological role, particularly in saline environments, as its genus name implies. The ability to thrive in high-salinity conditions may provide insights into the mechanisms of osmoregulation and cellular adaptation in extreme environments. Studying Salinicola sp. MIT1003 could yield valuable information regarding microbial survival strategies in hypersaline ecosystems, which are often characterized by high salt concentrations that pose significant challenges to most organisms. In summary, the genomic simplicity of Salinicola sp. MIT1003, as indicated by its single replicon, alongside its adaptation to saline habitats, underscores its potential importance in microbial ecology and evolutionary biology. The investigation of such organisms can enhance our understanding of life in extreme conditions and contribute to broader ecological and environmental studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusSalinicola
SpeciesSalinicola sp. MIT1003
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinicola sp. MIT1003 NODE_9_length_145719_cov_74.6774_ID_17,

Gene Summary

Adenine Count

760106 bp

Thymine Count

754845 bp

Guanine Count

1246744 bp

Cytosine Count

1252894 bp

Genome Length

4014589 bp

Protein-coding Genes

3455 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucarate dehydrataseBC443_07990Not AvailableNegative2941876 - 294323149122.3
5-dehydro-4-deoxyglucarate dehydrataseBC443_07995Not AvailableNegative2943346 - 294426333035.6
amidaseBC443_08000Not AvailablePositive2944594 - 294607853587.8
c4-dicarboxylate abc transporterBC443_08005Not AvailableNegative2946264 - 294756545740.1
amidohydrolaseBC443_08010Not AvailableNegative2947656 - 294848930969.6
gntr family transcriptional regulatorBC443_08015Not AvailablePositive2948681 - 294941827294.6
hypothetical proteinBC443_08020Not AvailableNegative2949453 - 294989915532.9
dipeptide abc transporter atp-binding proteinBC443_08025Not AvailableNegative2950117 - 295112136533.2
dipeptide abc transporter atp-binding protein dppdBC443_08030Not AvailableNegative2951118 - 295215837779.5
dipeptide abc transporter permease dppcBC443_08035Not AvailableNegative2952175 - 295308032407.6

Displaying genes 2631 – 2640 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.