Salinicola sp. MIT1003

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Salinicola

Description

Salinicola sp. MIT1003 is a unique microbial species characterized by possessing a single replicon, indicating a streamlined genomic organization. The genomic data for this organism is available under the accession MCAP00000000.1. This single replicon structure suggests a potential adaptation to its environmental niche, likely contributing to its efficiency in replication and metabolic processes. Salinicola sp. is notable for its ecological role, particularly in saline environments, as its genus name implies. The ability to thrive in high-salinity conditions may provide insights into the mechanisms of osmoregulation and cellular adaptation in extreme environments. Studying Salinicola sp. MIT1003 could yield valuable information regarding microbial survival strategies in hypersaline ecosystems, which are often characterized by high salt concentrations that pose significant challenges to most organisms. In summary, the genomic simplicity of Salinicola sp. MIT1003, as indicated by its single replicon, alongside its adaptation to saline habitats, underscores its potential importance in microbial ecology and evolutionary biology. The investigation of such organisms can enhance our understanding of life in extreme conditions and contribute to broader ecological and environmental studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusSalinicola
SpeciesSalinicola sp. MIT1003
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinicola sp. MIT1003 NODE_9_length_145719_cov_74.6774_ID_17,

Gene Summary

Adenine Count

760106 bp

Thymine Count

754845 bp

Guanine Count

1246744 bp

Cytosine Count

1252894 bp

Genome Length

4014589 bp

Protein-coding Genes

3455 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-f crispr-associated protein csy3BC443_13635Not AvailableNegative1235190 - 123622137706.4
type i-f crispr-associated protein csy2BC443_13640Not AvailableNegative1236241 - 123725137652.6
type i-f crispr-associated protein csy1BC443_13645Not AvailableNegative1237248 - 123860050791.7
type i-f crispr-associated helicase cas3BC443_13650Not AvailableNegative1239003 - 1242428128833.0
subtype i-f crispr-associated endonuclease cas1BC443_13655Not AvailableNegative1242425 - 124340536234.1
abc transporterBC443_13660Not AvailablePositive1243740 - 124443825177.6
zinc abc transporter permeaseBC443_13665Not AvailablePositive1244435 - 124531930726.0
abc transporter substrate-binding proteinBC443_13670Not AvailablePositive1245354 - 124636136192.1
cytoplasmic proteinBC443_13675Not AvailablePositive1246571 - 124783348288.1
abc transporter atp-binding proteinBC443_13680Not AvailableNegative1247873 - 124965165054.4

Displaying genes 1121 – 1130 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.