Vibrio parahaemolyticus strain 04-2548_100

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio parahaemolyticus strain 04-2548_100 is a Gram-negative, rod-shaped bacterium that thrives in aquatic environments as a facultative anaerobe, meaning it can grow in both the presence and absence of oxygen. This strain is characterized by its heterotrophic energy source and mobility, enabled by the presence of flagella. It has a mesophilic temperature range, with an optimal growth temperature of 20°C, which suggests it is well-suited for warm aquatic habitats. Vibrio parahaemolyticus strain 04-2548_100 is free-living and possesses a single replicon and a double membrane structure. Its biotic relationships include a diverse range of hosts, such as Homo sapiens, various aquatic species including Danio rerio and Penaeus vannamei, and other organisms like Ruditapes philippinarum and Holothuroidea. This strain is associated with significant health impacts in humans, including ear infections, wound infections, and various gastrointestinal illnesses such as gastroenteritis and food poisoning. It is particularly noted for causing bacterial seafoodborne gastroenteritis, highlighting its relevance to public health and food safety. The presence of V. parahaemolyticus in aquatic environments, particularly in association with marine organisms, underscores its ecological role in aquatic ecosystems. Its pathogenicity in humans, coupled with its free-living nature, illustrates the complex interactions between aquatic bacteria and their hosts, emphasizing the importance of monitoring such pathogens in relation to seafood consumption and public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio parahaemolyticus
Strainstrain 04-2548_100

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio parahaemolyticus strain 04-2548_100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens, Danio rerio, Pancrustacea
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio parahaemolyticus strain 04-2548_100 contig9, whole genome

Gene Summary

Adenine Count

1498374 bp

Thymine Count

1502912 bp

Guanine Count

1237773 bp

Cytosine Count

1225282 bp

Genome Length

5464342 bp

Protein-coding Genes

3657 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorBA740_07590Not AvailableNegative2736622 - 273719420649.8
arsenate reductase (glutaredoxin)BA740_07595Not AvailableNegative2737195 - 273754513050.8
hypothetical proteinBA740_07600Not AvailableNegative2737562 - 273901353739.3
sira-like family proteinBA740_07605Not AvailablePositive2739274 - 27395109102.81
ai-2e family transporterBA740_07610Not AvailablePositive2739512 - 274058239355.6
thioredoxin-dependent thiol peroxidaseBA740_07615Not AvailableNegative2740706 - 274117617517.9
glycine cleavage system transcriptional repressorBA740_07620Not AvailableNegative2741193 - 274173519974.0
4-hydroxy-tetrahydrodipicolinate synthaseBA740_07625Not AvailablePositive2742346 - 274322431231.4
outer membrane assembly protein bamcBA740_07630Not AvailablePositive2743277 - 274429638090.1
duf2897 domain-containing proteinBA740_07635Not AvailableNegative2744431 - 27446347823.54

Displaying genes 2411 – 2420 of 3657 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
VibriosisCausesPMC10472736
Acute gastroenteritisCausesPMC11171697
Wound infectionsCausesPMC11171697
SepticemiaCausesPMC11171697
Food poisoningCausesPMC12108532
Vibrio infectionsCausesPMC12108532
Acute gastroenteritisCausesPMC12849298
Wound infectionsCausesPMC12849298
Ear infectionsCausesPMC12849298
SepticemiaCausesPMC12849298

Displaying health effects 1 – 10 of 23 in total