Pseudofrankia sp. BMG5.36

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia sp. BMG5.36 is characterized by having a single replicon, which is crucial for understanding its genomic structure and replication mechanisms. The organism is cataloged under the accession number MBLO00000000.1, which allows for its identification and retrieval in biological databases. The single replicon trait suggests a streamlined genomic organization, which may confer certain advantages in terms of replication efficiency and stability. This characteristic can be particularly relevant for survival in various ecological niches, where rapid adaptation and resilience are essential for maintaining populations. Understanding the genomic features of Pseudofrankia sp. BMG5.36 can provide insights into its potential roles in various biological and ecological processes. For example, organisms with streamlined genomes often exhibit efficient metabolic pathways, which may allow them to thrive in specific environments or under particular stress conditions. This can be significant in biogeochemical cycling, where such microorganisms contribute to nutrient dynamics and ecosystem functioning. In summary, the single-replicon structure of Pseudofrankia sp. BMG5.36, alongside its unique genomic identification, highlights its potential ecological roles and adaptability within its environment. Further studies could elucidate its specific functions and contributions to microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia sp. BMG5.36
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipFree-living
Host(s)Coriariaceae, Datiscaceae, Dryadoideae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia sp. BMG5.36 contig_99, whole genome shotgun

Gene Summary

Adenine Count

1611466 bp

Thymine Count

1607965 bp

Guanine Count

3989138 bp

Cytosine Count

3995027 bp

Genome Length

11203906 bp

Protein-coding Genes

8250 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid replication initiator proteinBCD48_12790Not AvailablePositive6083883 - 608552660035.2
excisionaseBCD48_12795Not AvailablePositive6085597 - 60857826707.11
hypothetical proteinBCD48_12800Not AvailablePositive6085797 - 608726653486.6
Trna-tyrNot AvailableNot AvailablePositive6087395 - 6087479Not Available
yajq family cyclic di-gmp-binding proteinBCD48_12810Not AvailablePositive6087607 - 608809517983.4
orotate phosphoribosyltransferaseBCD48_12815Not AvailableNegative6088329 - 608883817826.7
zinc metalloprotease htpxBCD48_12820Not AvailableNegative6089041 - 608990730952.1
2-oxoglutarate ferredoxin oxidoreductase subunit alphaBCD48_12830Not AvailablePositive6091976 - 609386267370.1
2-oxoacid:ferredoxin oxidoreductase subunit betaBCD48_12835Not AvailablePositive6093859 - 609493238289.1
hypothetical proteinBCD48_12840Not AvailablePositive6095248 - 609705660624.4

Displaying genes 4561 – 4570 of 8328 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.