Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate abc transporter atp-binding protein | CC117_10570 | Not Available | Negative | 1221300 - 1222034 | 26396.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | CC117_10575 | Not Available | Positive | 1222448 - 1223998 | 55338.5 |
| hypothetical protein | CC117_10580 | Not Available | Positive | 1223995 - 1224876 | 28657.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CC117_10585 | Not Available | Positive | 1224873 - 1225772 | 32172.6 |
| diguanylate phosphodiesterase | CC117_10590 | Not Available | Positive | 1225878 - 1226831 | 33905.8 |
| diaminopimelate epimerase | CC117_10595 | Not Available | Positive | 1226849 - 1227805 | 32210.3 |
| gtpase hflx | CC117_10600 | Not Available | Positive | 1227979 - 1229478 | 53330.7 |
| repressor lexa | CC117_10605 | Not Available | Negative | 1229669 - 1230415 | 26589.1 |
| peptidoglycan-binding lysm | CC117_10610 | Not Available | Positive | 1231510 - 1231776 | 9340.54 |
| transcriptional regulator nrdr | CC117_10615 | Not Available | Positive | 1232044 - 1232631 | 20688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
