Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | CC117_10365 | Not Available | Positive | 1164179 - 1164406 | 8408.41 |
| translation initiation factor if-2 | CC117_10370 | Not Available | Positive | 1164636 - 1167737 | 104510.0 |
| hypothetical protein | CC117_10375 | Not Available | Positive | 1167815 - 1168156 | 12191.7 |
| ribosome-binding factor a | CC117_10380 | Not Available | Positive | 1168370 - 1168927 | 19958.0 |
| phosphoesterase | CC117_10385 | Not Available | Positive | 1168924 - 1170009 | 37251.6 |
| trna pseudouridine(55) synthase trub | CC117_10390 | Not Available | Positive | 1170017 - 1170949 | 31841.2 |
| riboflavin biosynthesis protein ribf | CC117_10395 | Not Available | Positive | 1171077 - 1172006 | 33800.1 |
| 30s ribosomal protein s15 | CC117_10400 | Not Available | Positive | 1172408 - 1172677 | 10488.9 |
| polyribonucleotide nucleotidyltransferase | CC117_10405 | Not Available | Positive | 1172927 - 1175116 | 77440.8 |
| zinc protease | CC117_10410 | Not Available | Positive | 1175160 - 1176563 | 49872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
