Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC117_10215 | Not Available | Positive | 1133289 - 1133522 | 8531.37 |
| ribosome maturation factor rimm | CC117_10220 | Not Available | Positive | 1133562 - 1134194 | 21879.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | CC117_10225 | Not Available | Positive | 1134347 - 1135120 | 28220.5 |
| 50s ribosomal protein l19 | CC117_10230 | Not Available | Positive | 1135492 - 1135848 | 13564.5 |
| signal peptidase i | CC117_10235 | Not Available | Positive | 1136042 - 1137235 | 41600.1 |
| ribonuclease hii | CC117_10240 | Not Available | Positive | 1137247 - 1137963 | 25093.3 |
| protein often found in actinomycetes clustered with signal peptidase and/or rnasehii | CC117_10245 | Not Available | Positive | 1137960 - 1138256 | 11907.0 |
| yran family protein | CC117_10250 | Not Available | Positive | 1138568 - 1138924 | 13123.8 |
| mg chelatase-like protein | CC117_10255 | Not Available | Positive | 1138924 - 1140462 | 54098.6 |
| dna protecting protein dpra | CC117_10260 | Not Available | Positive | 1140476 - 1141684 | 41582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
