Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna degradosome polyphosphate kinase | CC117_10065 | Not Available | Negative | 1098898 - 1101111 | 82078.1 |
| transglutaminase | CC117_10070 | Not Available | Positive | 1101301 - 1102296 | 34620.2 |
| diguanylate cyclase | CC117_10075 | Not Available | Positive | 1102792 - 1105188 | 82687.1 |
| cyclase | CC117_10080 | Not Available | Negative | 1105164 - 1105964 | 28483.6 |
| 2-phospho-l-lactate guanylyltransferase | CC117_10085 | Not Available | Negative | 1105961 - 1106653 | 23041.7 |
| glycerol acyltransferase | CC117_10090 | Not Available | Positive | 1106760 - 1107824 | 37645.7 |
| glycerol-3-phosphate dehydrogenase | CC117_10095 | Not Available | Positive | 1107836 - 1108828 | 34458.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CC117_10100 | Not Available | Negative | 1108854 - 1110200 | 47802.0 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | CC117_10105 | Not Available | Negative | 1110483 - 1111298 | 27640.3 |
| asnc family transcriptional regulator | CC117_10110 | Not Available | Positive | 1111508 - 1111741 | 8253.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
