Parafrankia colletiae strain Cc1.17

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Parafrankia colletiae strain Cc1.17 is characterized by having a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number MBLM00000000.1, indicating that it is documented in a biological database for reference and further study. As a member of the genus Parafrankia, this strain may exhibit specific traits and behaviors typical of its relatives, though such traits are not specified in the provided evidence. The single replicon may contribute to its adaptability and efficiency in resource utilization, which can be advantageous in various ecological niches. In summary, Parafrankia colletiae strain Cc1.17's single replicon may enhance its genomic stability and adaptability, potentially allowing it to thrive in diverse environments. Further research could elucidate the ecological roles and interactions of this strain within its habitat, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia colletiae
Strainstrain Cc1.17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parafrankia colletiae strain Cc1.17 contig_99, whole genome

Gene Summary

Adenine Count

1197090 bp

Thymine Count

1189795 bp

Guanine Count

2983559 bp

Cytosine Count

2986432 bp

Genome Length

8361025 bp

Protein-coding Genes

6343 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantoate--beta-alanine ligaseCC117_07990Not AvailablePositive7584734 - 758563331348.9
aspartate 1-decarboxylaseCC117_07995Not AvailablePositive7585637 - 758608315353.3
l-aspartate oxidaseCC117_08000Not AvailablePositive7586088 - 758779758579.9
nicotinate-nucleotide diphosphorylase (carboxylating)CC117_08005Not AvailablePositive7587794 - 758874731711.9
pantothenate kinaseCC117_08010Not AvailablePositive7588807 - 758956826796.3
hydrolaseCC117_08015Not AvailablePositive7589704 - 759069935723.4
flavoproteinCC117_08020Not AvailableNegative7590753 - 759129518731.4
fe-s oxidoreductaseCC117_08025Not AvailablePositive7591720 - 759285040146.8
ndp-hexose 4-ketoreductaseCC117_08030Not AvailablePositive7593428 - 759593292037.8
metallophosphoesteraseCC117_08035Not AvailablePositive7595978 - 759748653953.8

Displaying genes 5821 – 5830 of 6396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.