Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s1 | CC117_06380 | Not Available | Positive | 6785218 - 6786144 | 31175.5 |
| hypothetical protein | CC117_06385 | Not Available | Positive | 6786392 - 6786859 | 15397.6 |
| flavin reductase | CC117_06390 | Not Available | Positive | 6787059 - 6787628 | 19803.6 |
| transcriptional regulator | CC117_06395 | Not Available | Negative | 6787645 - 6788529 | 30723.9 |
| ferredoxin | CC117_06400 | Not Available | Positive | 6789233 - 6789556 | 11624.5 |
| succinyldiaminopimelate transaminase | CC117_06405 | Not Available | Positive | 6789616 - 6791316 | 59795.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CC117_06410 | Not Available | Positive | 6791488 - 6792333 | 29385.2 |
| succinyl-diaminopimelate desuccinylase | CC117_06415 | Not Available | Positive | 6792370 - 6793455 | 37678.8 |
| rossman fold protein, tigr00730 family | CC117_06420 | Not Available | Positive | 6793600 - 6794400 | 28167.5 |
| rossman fold protein, tigr00730 family | CC117_06425 | Not Available | Positive | 6794397 - 6794996 | 20740.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
