Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dehydratase | CC117_05970 | Not Available | Positive | 6682083 - 6683108 | 37456.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CC117_05975 | Not Available | Positive | 6683108 - 6683701 | 21094.1 |
| methyltransferase | CC117_05980 | Not Available | Positive | 6684326 - 6685609 | 45514.4 |
| hypothetical protein | CC117_05985 | Not Available | Negative | 6686088 - 6686723 | 20037.5 |
| teichoic acid transporter | CC117_05990 | Not Available | Positive | 6686902 - 6689145 | 76015.0 |
| lipopolysaccharide biosynthesis protein | CC117_05995 | Not Available | Positive | 6689367 - 6690950 | 54883.0 |
| hypothetical protein | CC117_06000 | Not Available | Negative | 6691473 - 6692825 | 48790.2 |
| beta-mannanase | CC117_06005 | Not Available | Positive | 6693377 - 6694537 | 41897.6 |
| short-chain dehydrogenase | CC117_06010 | Not Available | Negative | 6694563 - 6695339 | 26714.5 |
| hypothetical protein | CC117_06015 | Not Available | Negative | 6695426 - 6696352 | 34920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
