Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylallyltranstransferase | CC117_05555 | Not Available | Negative | 6027346 - 6028362 | 35291.0 |
| phytoene dehydrogenase | CC117_05560 | Not Available | Negative | 6028359 - 6030005 | 56423.6 |
| squalene synthase hpnd | CC117_05565 | Not Available | Negative | 6030002 - 6030904 | 32038.1 |
| squalene synthase hpnc | CC117_05570 | Not Available | Negative | 6030901 - 6031923 | 35381.4 |
| short-chain dehydrogenase | CC117_05575 | Not Available | Negative | 6032462 - 6033292 | 28251.4 |
| tetr family transcriptional regulator | CC117_05585 | Not Available | Negative | 6034249 - 6035178 | 30871.0 |
| hypothetical protein | CC117_05590 | Not Available | Positive | 6035357 - 6037591 | 78926.6 |
| hypothetical protein | CC117_05595 | Not Available | Negative | 6037781 - 6039121 | 47751.9 |
| glycerate kinase | CC117_05600 | Not Available | Positive | 6039350 - 6040522 | 38352.0 |
| abc transporter substrate-binding protein | CC117_05605 | Not Available | Negative | 6040526 - 6041719 | 42276.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
