Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase | CC117_05505 | Not Available | Negative | 6012064 - 6012891 | 30383.7 |
| transposase | CC117_05510 | Not Available | Negative | 6013220 - 6014419 | 43665.4 |
| urease accessory protein | CC117_05515 | Not Available | Positive | 6014704 - 6015423 | 23752.4 |
| urease accessory protein ureg | CC117_05520 | Not Available | Positive | 6015596 - 6016390 | 26344.5 |
| glycosyl transferase | CC117_05525 | Not Available | Negative | 6017176 - 6018540 | 48462.6 |
| emrb/qaca family drug resistance transporter | CC117_05530 | Not Available | Positive | 6019079 - 6020623 | 52824.1 |
| tetr family transcriptional regulator | CC117_05535 | Not Available | Positive | 6020631 - 6021305 | 24537.1 |
| hopanoid biosynthesis associated radical sam protein hpnh | CC117_05540 | Not Available | Negative | 6021584 - 6022591 | 37372.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CC117_05545 | Not Available | Negative | 6023065 - 6024939 | 63913.2 |
| squalene--hopene cyclase | CC117_05550 | Not Available | Negative | 6024936 - 6027254 | 83598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
