Parafrankia colletiae strain Cc1.17

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Parafrankia colletiae strain Cc1.17 is characterized by having a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number MBLM00000000.1, indicating that it is documented in a biological database for reference and further study. As a member of the genus Parafrankia, this strain may exhibit specific traits and behaviors typical of its relatives, though such traits are not specified in the provided evidence. The single replicon may contribute to its adaptability and efficiency in resource utilization, which can be advantageous in various ecological niches. In summary, Parafrankia colletiae strain Cc1.17's single replicon may enhance its genomic stability and adaptability, potentially allowing it to thrive in diverse environments. Further research could elucidate the ecological roles and interactions of this strain within its habitat, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia colletiae
Strainstrain Cc1.17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parafrankia colletiae strain Cc1.17 contig_99, whole genome

Gene Summary

Adenine Count

1197090 bp

Thymine Count

1189795 bp

Guanine Count

2983559 bp

Cytosine Count

2986432 bp

Genome Length

8361025 bp

Protein-coding Genes

6343 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCC117_24900Not AvailableNegative5878317 - 587879016442.2
aldehyde dehydrogenaseCC117_24905Not AvailableNegative5878801 - 588032455063.3
hypothetical proteinCC117_24915Not AvailableNegative5880861 - 588127114316.9
diol dehydratase reactivase subunit alphaCC117_24920Not AvailableNegative5881366 - 588322563475.6
propanediol utilization proteinCC117_24925Not AvailableNegative5883245 - 588383520889.2
propanediol dehydrataseCC117_24930Not AvailableNegative5883835 - 588553260841.3
glycerol dehydrogenaseCC117_24935Not AvailableNegative5885658 - 588612217161.4
aquaporinCC117_24940Not AvailablePositive5886416 - 588740534123.1
transcriptional regulatorCC117_24945Not AvailableNegative5887323 - 588888556508.6
propionyl-coa synthetaseCC117_24950Not AvailablePositive5889143 - 589102366822.8

Displaying genes 4511 – 4520 of 6396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.