Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC117_21340 | Not Available | Negative | 4817535 - 4817801 | 8991.71 |
| amp-dependent synthetase | CC117_21345 | Not Available | Positive | 4817987 - 4819477 | 52332.5 |
| pyridoxamine 5'-phosphate oxidase | CC117_21350 | Not Available | Positive | 4819482 - 4819970 | 18016.6 |
| short-chain dehydrogenase | CC117_21355 | Not Available | Positive | 4820089 - 4820835 | 26179.3 |
| carboxymuconolactone decarboxylase | CC117_21360 | Not Available | Negative | 4820888 - 4821469 | 19940.5 |
| short-chain dehydrogenase | CC117_21365 | Not Available | Negative | 4821560 - 4822306 | 25668.8 |
| amp-dependent synthetase | CC117_21370 | Not Available | Negative | 4823003 - 4824712 | 61128.8 |
| acyl dehydratase | CC117_21375 | Not Available | Negative | 4824856 - 4826079 | 45549.5 |
| alcohol dehydrogenase | CC117_21380 | Not Available | Negative | 4826095 - 4827078 | 33682.1 |
| aldehyde dehydrogenase | CC117_21385 | Not Available | Negative | 4827142 - 4828560 | 49408.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
