Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | CC117_19715 | Not Available | Positive | 4422215 - 4422418 | 7145.33 |
| llm class f420-dependent oxidoreductase | CC117_19720 | Not Available | Negative | 4422533 - 4423465 | 32604.3 |
| peptidase m13 | CC117_19725 | Not Available | Positive | 4423786 - 4425741 | 72596.1 |
| lysr family transcriptional regulator | CC117_19730 | Not Available | Negative | 4425788 - 4426531 | 25680.7 |
| hypothetical protein | CC117_19735 | Not Available | Positive | 4426795 - 4427400 | 22376.6 |
| hypothetical protein | CC117_19740 | Not Available | Negative | 4427507 - 4427887 | 13595.0 |
| hypothetical protein | CC117_19745 | Not Available | Negative | 4427909 - 4428298 | 13752.2 |
| rna polymerase subunit sigma-24 | CC117_19750 | Not Available | Positive | 4428833 - 4429378 | 20221.3 |
| hypothetical protein | CC117_19755 | Not Available | Positive | 4429417 - 4430604 | 39392.5 |
| metalloprotease | CC117_19760 | Not Available | Positive | 4430991 - 4431899 | 31555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
