Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC117_18415 | Not Available | Positive | 4044087 - 4044452 | 12893.6 |
| phosphopantetheine-binding protein | CC117_18420 | Not Available | Positive | 4044710 - 4044967 | 9229.84 |
| polyketide cyclase | CC117_18425 | Not Available | Positive | 4045080 - 4045568 | 18662.7 |
| cupin | CC117_18430 | Not Available | Positive | 4045582 - 4046004 | 15124.0 |
| beta-acp synthase | CC117_18435 | Not Available | Positive | 4046079 - 4047365 | 44753.4 |
| beta-ketoacyl synthase | CC117_18440 | Not Available | Positive | 4047362 - 4048663 | 44857.7 |
| short-chain dehydrogenase | CC117_18445 | Not Available | Positive | 4048777 - 4049514 | 25154.3 |
| antibiotic biosynthesis monooxygenase | CC117_18450 | Not Available | Positive | 4049514 - 4049837 | 12068.3 |
| antibiotic biosynthesis monooxygenase | CC117_18455 | Not Available | Positive | 4049834 - 4050175 | 12134.4 |
| llm class f420-dependent oxidoreductase | CC117_18460 | Not Available | Negative | 4050349 - 4051278 | 31329.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
