Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | CC117_03885 | Not Available | Positive | 3020484 - 3020705 | 8515.51 |
| 50s ribosomal protein l36 | CC117_03890 | Not Available | Positive | 3020761 - 3020874 | 4389.68 |
| 30s ribosomal protein s13 | CC117_03895 | Not Available | Positive | 3021091 - 3021471 | 14475.5 |
| 30s ribosomal protein s11 | CC117_03900 | Not Available | Positive | 3021550 - 3021954 | 14342.3 |
| 30s ribosomal protein s4 | CC117_03905 | Not Available | Positive | 3021990 - 3022619 | 23823.7 |
| dna-directed rna polymerase subunit alpha | CC117_03910 | Not Available | Positive | 3022802 - 3023851 | 37954.8 |
| 50s ribosomal protein l17 | CC117_03915 | Not Available | Positive | 3023972 - 3024562 | 20787.6 |
| trna pseudouridine(38,39,40) synthase trua | CC117_03920 | Not Available | Positive | 3024817 - 3025665 | 29902.2 |
| hypothetical protein | CC117_03925 | Not Available | Negative | 3025729 - 3027294 | 52278.6 |
| 50s ribosomal protein l13 | CC117_03930 | Not Available | Positive | 3027919 - 3028362 | 16374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
