Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit n | CC117_03585 | Not Available | Positive | 2967279 - 2968856 | 54772.9 |
| geranylgeranyl pyrophosphate synthase | CC117_03590 | Not Available | Positive | 2968864 - 2969880 | 35792.6 |
| hypothetical protein | CC117_03595 | Not Available | Negative | 2969966 - 2971081 | 36602.8 |
| hypothetical protein | CC117_03600 | Not Available | Positive | 2971095 - 2971292 | 6788.35 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | CC117_03605 | Not Available | Negative | 2971897 - 2972958 | 37754.6 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | CC117_03610 | Not Available | Negative | 2972955 - 2974841 | 66777.6 |
| nadp oxidoreductase | CC117_03615 | Not Available | Positive | 2975847 - 2976887 | 34369.9 |
| zinc metalloprotease htpx | CC117_03620 | Not Available | Positive | 2976971 - 2977843 | 30995.0 |
| yajq family cyclic di-gmp-binding protein | CC117_03625 | Not Available | Negative | 2978393 - 2978881 | 18092.5 |
| Trna-tyr | Not Available | Not Available | Positive | 2979013 - 2979097 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
