Parafrankia colletiae strain Cc1.17

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Parafrankia colletiae strain Cc1.17 is characterized by having a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number MBLM00000000.1, indicating that it is documented in a biological database for reference and further study. As a member of the genus Parafrankia, this strain may exhibit specific traits and behaviors typical of its relatives, though such traits are not specified in the provided evidence. The single replicon may contribute to its adaptability and efficiency in resource utilization, which can be advantageous in various ecological niches. In summary, Parafrankia colletiae strain Cc1.17's single replicon may enhance its genomic stability and adaptability, potentially allowing it to thrive in diverse environments. Further research could elucidate the ecological roles and interactions of this strain within its habitat, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia colletiae
Strainstrain Cc1.17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parafrankia colletiae strain Cc1.17 contig_99, whole genome

Gene Summary

Adenine Count

1197090 bp

Thymine Count

1189795 bp

Guanine Count

2983559 bp

Cytosine Count

2986432 bp

Genome Length

8361025 bp

Protein-coding Genes

6343 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone dnajCC117_01135Not AvailableNegative266622 - 26776440269.8
heat-inducible transcriptional repressor hrcaCC117_01140Not AvailableNegative267764 - 26878336679.3
coproporphyrinogen iii oxidaseCC117_01145Not AvailableNegative269051 - 27028043323.1
hypothetical proteinCC117_01150Not AvailablePositive270511 - 2707147409.77
elongation factor 4CC117_01155Not AvailableNegative270917 - 27277667881.8
30s ribosomal protein s20CC117_01160Not AvailablePositive273045 - 2733149725.73
hypothetical proteinCC117_01165Not AvailableNegative273495 - 27384811677.0
dna polymerase iii subunit deltaCC117_01170Not AvailableNegative273845 - 27488235717.8
competence protein comecCC117_01175Not AvailableNegative274884 - 27734682474.4
dna-binding proteinCC117_01180Not AvailableNegative277361 - 27851838955.6

Displaying genes 221 – 230 of 6396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.