Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | CC117_14530 | Not Available | Negative | 2543435 - 2544097 | 21680.7 |
| pup--protein ligase | CC117_14535 | Not Available | Negative | 2544353 - 2545711 | 51857.1 |
| hypothetical protein | CC117_14540 | Not Available | Negative | 2545722 - 2546813 | 35910.2 |
| carboxymethylenebutenolidase | CC117_14545 | Not Available | Positive | 2547372 - 2548136 | 26463.2 |
| ribosome small subunit-dependent gtpase a | CC117_14550 | Not Available | Positive | 2548588 - 2549835 | 43709.0 |
| proteasome subunit alpha | CC117_14555 | Not Available | Negative | 2549947 - 2550675 | 26514.5 |
| proteasome subunit beta | CC117_14560 | Not Available | Negative | 2550677 - 2551462 | 27631.7 |
| ubiquitin-like protein pup | CC117_14565 | Not Available | Negative | 2551857 - 2552075 | 8073.93 |
| proteasome accessory factor pafa2 | CC117_14570 | Not Available | Negative | 2552295 - 2553794 | 55869.0 |
| proteasome atpase | CC117_14575 | Not Available | Negative | 2554316 - 2556121 | 66409.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
