Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | CC117_13490 | Not Available | Positive | 2162013 - 2162564 | 20090.1 |
| methionyl-trna formyltransferase | CC117_13495 | Not Available | Positive | 2162750 - 2163706 | 32827.5 |
| rrna cytosine-c5-methyltransferase | CC117_13500 | Not Available | Positive | 2163703 - 2165187 | 51807.4 |
| ribulose-phosphate 3-epimerase | CC117_13505 | Not Available | Positive | 2165293 - 2166009 | 25443.3 |
| riboflavin synthase subunit alpha | CC117_13510 | Not Available | Positive | 2166368 - 2167036 | 23141.6 |
| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | CC117_13515 | Not Available | Positive | 2167036 - 2168523 | 53149.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | CC117_13520 | Not Available | Positive | 2168520 - 2169017 | 16602.9 |
| hypothetical protein | CC117_13525 | Not Available | Positive | 2169377 - 2171074 | 56469.6 |
| hypothetical protein | CC117_13530 | Not Available | Positive | 2171121 - 2172170 | 34861.7 |
| translation initiation factor if-3 | CC117_13535 | Not Available | Positive | 2172784 - 2173230 | 17006.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
