Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | CC117_13240 | Not Available | Positive | 2096818 - 2097468 | 23256.3 |
| kanamycin kinase | CC117_13245 | Not Available | Negative | 2097493 - 2098512 | 34497.8 |
| shikimate dehydrogenase | CC117_13250 | Not Available | Negative | 2098509 - 2099297 | 27612.4 |
| 3-dehydroquinate synthase | CC117_13255 | Not Available | Negative | 2099345 - 2100397 | 36483.5 |
| amp-dependent synthetase | CC117_13260 | Not Available | Positive | 2100603 - 2103221 | 92878.2 |
| abc transporter | CC117_13265 | Not Available | Positive | 2103261 - 2105159 | 66677.8 |
| xre family transcriptional regulator | CC117_13270 | Not Available | Negative | 2105123 - 2105758 | 22714.7 |
| methyltransferase type 12 | CC117_13275 | Not Available | Positive | 2105906 - 2106583 | 24387.0 |
| glycosyl transferase family 1 | CC117_13280 | Not Available | Positive | 2107119 - 2108354 | 45426.5 |
| epimerase | CC117_13285 | Not Available | Positive | 2108454 - 2109428 | 35269.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
