Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Frankiales
Family
Frankiaceae
Genus
Parafrankia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Frankiales |
| Family | Frankiaceae |
| Genus | Parafrankia |
| Species | Parafrankia colletiae |
| Strain | strain Cc1.17 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197090 bp
Thymine Count
1189795 bp
Guanine Count
2983559 bp
Cytosine Count
2986432 bp
Genome Length
8361025 bp
Protein-coding Genes
6343 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| globin | CC117_33240 | Not Available | Positive | 1956731 - 1957225 | 18565.5 |
| hxlr family transcriptional regulator | CC117_33245 | Not Available | Negative | 1957165 - 1957596 | 16033.3 |
| antibiotic biosynthesis monooxygenase | CC117_33250 | Not Available | Positive | 1957724 - 1958542 | 30331.4 |
| antibiotic biosynthesis monooxygenase | CC117_33255 | Not Available | Negative | 1958594 - 1958920 | 11697.5 |
| epoxide hydrolase | CC117_33260 | Not Available | Negative | 1958965 - 1960086 | 41910.0 |
| marr family transcriptional regulator | CC117_33265 | Not Available | Positive | 1960153 - 1960635 | 17517.7 |
| tetr family transcriptional regulator | CC117_33270 | Not Available | Negative | 1961269 - 1962024 | 26621.6 |
| short-chain dehydrogenase | CC117_33275 | Not Available | Positive | 1962153 - 1962830 | 23155.6 |
| doxx family protein | CC117_33280 | Not Available | Positive | 1962911 - 1963282 | 12957.4 |
| short-chain dehydrogenase | CC117_33285 | Not Available | Positive | 1963396 - 1964178 | 26757.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
