Helicobacter pylori strain 2007

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 2007 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. It possesses flagella, which enables motility, although it is noted to be non-mobile in specific contexts. The strain is adapted to a mesophilic temperature range, with an optimal growth temperature of 37°C, making it well-suited for its host-associated habitat. This strain is free-living and has a single replicon with two membranes, characteristics typical of gram-negative bacteria. Its known hosts include a variety of species such as Homo sapiens (humans), Gallus gallus (domestic chickens), various Aves (birds), Primates, Mammalia, and Rodentia, indicating a broad ecological niche. Helicobacter pylori strain 2007 is notably pathogenic to humans, linked to several health conditions. It is associated with chronic gastric inflammation, gastric ulcers, and various forms of gastric cancer, including adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. The bacterium's pathogenicity contributes to a spectrum of gastrointestinal diseases, such as gastritis, peptic ulcer disease, and functional dyspepsia. The relationship between Helicobacter pylori strain 2007 and its human host underscores its significant role in gastrointestinal health and disease. Understanding this strain's biology, including its pathogenic effects and host interactions, can provide insights into the mechanisms underlying gastric disorders and the potential for targeted therapeutic strategies.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 2007

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 2007
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 2007


Gene Summary

Adenine Count

520201 bp

Thymine Count

506313 bp

Guanine Count

328964 bp

Cytosine Count

322654 bp

Genome Length

1678132 bp

Protein-coding Genes

1484 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s20BB472_00090Not AvailableNegative18995 - 1926410196.7
phosphoglucosamine mutaseBB472_00095Not AvailablePositive19354 - 2069149141.4
signal peptidase iiBB472_00100Not AvailablePositive20685 - 2115817939.4
Trna-valNot AvailableNot AvailablePositive21178 - 21253Not Available
urease subunit alphaBB472_00110Not AvailablePositive21523 - 2223926569.1
urease subunit alphaBB472_00115Not AvailablePositive22243 - 2395261717.2
acid-activated urea channelBB472_00120Not AvailablePositive24187 - 2477421692.7
urease accessory protein ureeBB472_00125Not AvailablePositive24776 - 2528819467.7
urease accessory protein urefBB472_00130Not AvailablePositive25300 - 2606428520.3
urease accessory protein uregBB472_00135Not AvailablePositive26093 - 2669221937.6

Displaying genes 21 – 30 of 1527 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total