Helicobacter pylori strain 3133

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 3133 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. This strain is primarily host-associated and exhibits a single-cell arrangement. H. pylori 3133 is notable for its presence of flagella, which may facilitate its motility, though it is indicated to be non-mobile in this context. The organism thrives optimally at 37°C, within a mesophilic temperature range, and has a single replicon and a double membrane structure. This strain is recognized for its pathogenicity in humans and has been linked to various gastrointestinal diseases, including chronic gastric inflammation, gastric ulcers, and several forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. Its biotic relationships extend beyond humans to include a range of hosts, including Gallus gallus (chickens), various primates, and other mammals, as well as certain amoebas and rodents. The health effects associated with H. pylori 3133 underscore its role in significant gastrointestinal disorders, including functional dyspepsia and gastroesophageal reflux disease (GERD), among others. The strain's ability to induce chronic inflammation and various forms of cancer emphasizes its importance in medical microbiology. Understanding the pathogenic mechanisms of H. pylori 3133 is crucial for developing effective treatments and preventive strategies for the diseases it causes, highlighting its ecological significance in both human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 3133

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 3133
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 3133 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

518247 bp

Thymine Count

510376 bp

Guanine Count

327292 bp

Cytosine Count

328293 bp

Genome Length

1684208 bp

Protein-coding Genes

1492 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m23BB446_04555Not AvailablePositive1640394 - 164133235568.2
polymer-forming cytoskeletal family proteinBB446_04560Not AvailablePositive1641251 - 164166114597.7
transcription-repair coupling factorBB446_04565Not AvailablePositive1641665 - 1644664113069.0
ubiquinol-cytochrome c reductase iron-sulfur subunitBB446_04570Not AvailablePositive1644788 - 164529118256.1
ubiquinol cytochrome c oxidoreductaseBB446_04575Not AvailablePositive1645302 - 164654047700.7
cytochrome cBB446_04580Not AvailablePositive1646537 - 164739431683.4
metal-dependent hydrolaseBB446_04590Not AvailablePositive1648705 - 164924121057.8
cell division protein fstiBB446_04595Not AvailableNegative1649636 - 165148369340.5
flagellar hook-basal body complex protein flieBB446_04600Not AvailableNegative1651639 - 165196812193.5
flagellar basal body rod protein flgcBB446_04605Not AvailableNegative1652095 - 165258017706.6

Displaying genes 1501 – 1510 of 1548 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total