Helicobacter pylori strain 3133

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 3133 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. This strain is primarily host-associated and exhibits a single-cell arrangement. H. pylori 3133 is notable for its presence of flagella, which may facilitate its motility, though it is indicated to be non-mobile in this context. The organism thrives optimally at 37°C, within a mesophilic temperature range, and has a single replicon and a double membrane structure. This strain is recognized for its pathogenicity in humans and has been linked to various gastrointestinal diseases, including chronic gastric inflammation, gastric ulcers, and several forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. Its biotic relationships extend beyond humans to include a range of hosts, including Gallus gallus (chickens), various primates, and other mammals, as well as certain amoebas and rodents. The health effects associated with H. pylori 3133 underscore its role in significant gastrointestinal disorders, including functional dyspepsia and gastroesophageal reflux disease (GERD), among others. The strain's ability to induce chronic inflammation and various forms of cancer emphasizes its importance in medical microbiology. Understanding the pathogenic mechanisms of H. pylori 3133 is crucial for developing effective treatments and preventive strategies for the diseases it causes, highlighting its ecological significance in both human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 3133

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 3133
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 3133 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

518247 bp

Thymine Count

510376 bp

Guanine Count

327292 bp

Cytosine Count

328293 bp

Genome Length

1684208 bp

Protein-coding Genes

1492 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipooligosaccharide 5g8 epitope biosynthesis-associated protein (lex2b)BB446_00395Not AvailablePositive75866 - 7672633381.8
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase iiBB446_00400Not AvailablePositive76910 - 7794439006.2
ubiquitin--protein ligaseBB446_00405Not AvailablePositive78031 - 7887032181.9
gtp cyclohydrolase iiBB446_00410Not AvailablePositive78960 - 7953821651.2
molybdopterin synthase sulfur carrier subunitBB446_00415Not AvailablePositive79587 - 798088150.96
molybdenum cofactor biosynthesis protein moaeBB446_00420Not AvailablePositive79809 - 8024616709.5
molybdopterin adenylyltransferaseBB446_00425Not AvailablePositive80259 - 8078919666.0
molybdenum cofactor biosynthesis protein cBB446_00430Not AvailablePositive80798 - 8127417212.2
neuraminyllactose-binding hemagglutininBB446_00435Not AvailablePositive81393 - 8217529034.9
hypothetical proteinBB446_00440Not AvailablePositive82205 - 8304133287.3

Displaying genes 101 – 110 of 1548 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total