Pluralibacter gergoviae strain C7B

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Pluralibacter

Description

Pluralibacter gergoviae strain C7B is a Gram-negative bacterium characterized by its rod shape. This strain is notable for having a single replicon, which can be indicative of its genetic organization and replication strategy. The primary known host for this bacterium is the amphibian species Gastrotheca, suggesting a potential ecological association within this group. The interaction between P. gergoviae and its amphibian host may be significant in understanding microbial dynamics in amphibian habitats, particularly in how such bacteria may contribute to the health and maintenance of these ecosystems. The accession number for strain C7B is MBGD00000000.1, which provides a reference point for further genomic studies and analyses. The specific traits of P. gergoviae, particularly its Gram-negative status and rod shape, may also influence its physiological characteristics and ecological roles, such as nutrient cycling or symbiotic relationships within the amphibian host environment. In summary, P. gergoviae strain C7B exemplifies a bacterium that is specifically associated with amphibians, particularly Gastrotheca, highlighting the intricate relationships that exist within microbial communities and their hosts in natural ecosystems. Understanding such interactions is essential for broader ecological studies and may have implications for amphibian health and conservation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPluralibacter
SpeciesPluralibacter gergoviae
Strainstrain C7B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pluralibacter gergoviae strain C7B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Amphibia, Gastrotheca
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pluralibacter gergoviae strain C7B contig_9, whole genome shotgun

Gene Summary

Adenine Count

1225582 bp

Thymine Count

1225944 bp

Guanine Count

1732144 bp

Cytosine Count

1706585 bp

Genome Length

5890255 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

323 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyproline-2-epimeraseBB778_06115Not AvailablePositive5520036 - 552098334063.4
d-amino-acid oxidaseBB778_06120Not AvailablePositive5520980 - 552208939191.3
(2fe-2s)-binding proteinBB778_06125Not AvailablePositive5522086 - 55223499468.36
fad/nad(p)-binding oxidoreductaseBB778_06130Not AvailablePositive5522330 - 552359845132.7
homoprotocatechuate degradation operon regulator, hparBB778_06135Not AvailableNegative5523636 - 552410017557.2
4-hydroxyphenylacetate degradation proteinBB778_06140Not AvailablePositive5524365 - 552564545695.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseBB778_06145Not AvailablePositive5525642 - 552710852986.8
3,4-dihydroxyphenylacetate 2,3-dioxygenaseBB778_06150Not AvailablePositive5527147 - 552822040322.6
5-carboxymethyl-2-hydroxymuconate delta-isomeraseBB778_06155Not AvailablePositive5528269 - 552864914289.2
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseBB778_06160Not AvailablePositive5528711 - 552951429400.2

Displaying genes 5121 – 5130 of 5410 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.