Pluralibacter gergoviae strain C7B

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Pluralibacter

Description

Pluralibacter gergoviae strain C7B is a Gram-negative bacterium characterized by its rod shape. This strain is notable for having a single replicon, which can be indicative of its genetic organization and replication strategy. The primary known host for this bacterium is the amphibian species Gastrotheca, suggesting a potential ecological association within this group. The interaction between P. gergoviae and its amphibian host may be significant in understanding microbial dynamics in amphibian habitats, particularly in how such bacteria may contribute to the health and maintenance of these ecosystems. The accession number for strain C7B is MBGD00000000.1, which provides a reference point for further genomic studies and analyses. The specific traits of P. gergoviae, particularly its Gram-negative status and rod shape, may also influence its physiological characteristics and ecological roles, such as nutrient cycling or symbiotic relationships within the amphibian host environment. In summary, P. gergoviae strain C7B exemplifies a bacterium that is specifically associated with amphibians, particularly Gastrotheca, highlighting the intricate relationships that exist within microbial communities and their hosts in natural ecosystems. Understanding such interactions is essential for broader ecological studies and may have implications for amphibian health and conservation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPluralibacter
SpeciesPluralibacter gergoviae
Strainstrain C7B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pluralibacter gergoviae strain C7B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Amphibia, Gastrotheca
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pluralibacter gergoviae strain C7B contig_9, whole genome shotgun

Gene Summary

Adenine Count

1225582 bp

Thymine Count

1225944 bp

Guanine Count

1732144 bp

Cytosine Count

1706585 bp

Genome Length

5890255 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

323 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bamaBB778_04855Not AvailableNegative5227807 - 523021289103.1
rip metalloprotease rsepBB778_04860Not AvailableNegative5230244 - 523159649273.6
cdp-diglyceride synthetaseBB778_04865Not AvailableNegative5231608 - 523246531325.3
(2e,6e)-farnesyl- diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthaseBB778_04870Not AvailableNegative5232478 - 523323628504.9
1-deoxy-d-xylulose-5-phosphate reductoisomeraseBB778_04875Not AvailableNegative5233423 - 523461943157.8
ribosome recycling factorBB778_04880Not AvailableNegative5234708 - 523526520649.7
ump kinaseBB778_04885Not AvailableNegative5235418 - 523614325928.8
translation elongation factor tsBB778_04890Not AvailableNegative5236296 - 523714730290.6
30s ribosomal protein s2BB778_04895Not AvailableNegative5237261 - 523798626916.3
type i methionyl aminopeptidaseBB778_04900Not AvailablePositive5238298 - 523909229228.3

Displaying genes 4871 – 4880 of 5410 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.