Mycobacterium malmoense strain E3012

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium malmoense strain E3012 is a non-tuberculous mycobacterium that is notably characterized by the presence of flagella and possesses a single replicon. This strain is known to infect Homo sapiens, where it can lead to significant health issues, including bacterial endocarditis and non-tuberculous mycobacterial pulmonary disease (NTM-PD). As a member of the Mycobacterium genus, M. malmoense is part of a group of bacteria that have been increasingly recognized for their role in human disease, particularly in immunocompromised individuals or those with underlying lung conditions. The presence of flagella suggests a potential for motility, which may influence its ability to colonize or invade host tissues, although the specific mechanisms and implications of this trait in pathogenicity require further investigation. The strain is cataloged under the accession number MBEE00000000.1, indicating its genomic information is available for reference. Understanding the genetic and phenotypic traits of M. malmoense, such as its motility and pathogenic potential, is important for public health and clinical microbiology. The ecological role of this organism may also be significant, as non-tuberculous mycobacteria are often found in environmental sources, influencing their interaction with human hosts and the epidemiology of related diseases. Such insights are crucial for developing strategies to mitigate infections associated with M. malmoense.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium malmoense
Strainstrain E3012

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium malmoense strain E3012 contig_99, whole genome

Gene Summary

Adenine Count

857995 bp

Thymine Count

862949 bp

Guanine Count

1927546 bp

Cytosine Count

1923509 bp

Genome Length

5571999 bp

Protein-coding Genes

4956 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vii secretion protein ecccA5677_10795P9WNA7Negative323310 - 326942127223.0
type vii secretion integral membrane protein eccdA5677_10800P9WNQ0Positive327037 - 32846446648.1
type vii secretion-associated serine protease mycosinA5677_10805I6YC58Positive328485 - 32975641860.5
type vii secretion protein eccbA5677_10810P9WNR0Negative329721 - 33108246641.3
cutinaseA5677_10815Not AvailablePositive331203 - 33203927945.1
cutinaseA5677_10820O06319Positive332097 - 33271720642.7
trna pseudouridine(38,39,40) synthase truaA5677_10825Q73S41Negative332714 - 33342125995.1
50s ribosomal protein l17A5677_10830A3PVL9Negative333552 - 33418422458.3
dna-directed rna polymerase subunit alphaA5677_10835A0QKU5Negative334262 - 33530537610.5
30s ribosomal protein s4A5677_10840P45811Negative335382 - 33598723375.1

Displaying genes 321 – 330 of 5030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

465 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 465 metabolites

Health Effects

Health ConditionRelationReference
Ntm-pdCausesPMC11100324
Bacterial endocarditisCausesPMC7642850

Displaying health effects 1 – 2 of 2 in total