Chryseobacterium artocarpi strain UTM-3

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium artocarpi strain UTM-3 is characterized as a rod-shaped bacterium. It possesses a single replicon, indicating a simple genomic structure that may facilitate efficient replication and maintenance of its genetic material. The strain is cataloged under the accession number MAYH00000000.1, which serves as a reference point for its genomic data. This strain is part of the Chryseobacterium genus, known for its diverse ecological roles, often found in various environments, including soil and water. The rod shape of Chryseobacterium artocarpi UTM-3 suggests adaptability in its habitat, potentially allowing for efficient nutrient uptake and mobility in its surroundings. The ecological significance of Chryseobacterium artocarpi strain UTM-3 may lie in its interactions within microbial communities. As a member of the Chryseobacterium genus, it may contribute to the degradation of organic matter and the cycling of nutrients in its environment, supporting overall ecosystem health. The solitary replicon could also suggest a streamlined capability for responding to environmental changes, enhancing its survival ability in fluctuating conditions. In summary, Chryseobacterium artocarpi strain UTM-3’s rod shape and single replicon contribute to its ecological adaptability and potential role in nutrient cycling, reflecting the broader ecological functions of its genus within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium artocarpi
Strainstrain UTM-3

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium artocarpi strain UTM-3


Gene Summary

Adenine Count

1617054 bp

Thymine Count

1603244 bp

Guanine Count

867672 bp

Cytosine Count

847637 bp

Genome Length

4935607 bp

Protein-coding Genes

4307 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive31 - 138Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive298 - 3054Not Available
hypothetical proteinBBI01_00005Not AvailableNegative220 - 142247888.6
alkane 1-monooxygenaseBBI01_00010Not AvailableNegative1740 - 276237758.9
hypothetical proteinBBI01_00015Not AvailableNegative2824 - 312611208.6
16s ribosomal rnaNot AvailableNot AvailablePositive3642 - 5163Not Available
hypothetical proteinBBI01_00020Not AvailableNegative3155 - 387728229.1
cupinBBI01_00025Not AvailableNegative4142 - 464818462.8
nuclease pinBBI01_00030Not AvailableNegative4778 - 550627598.9
isochorismataseBBI01_00035P21367Negative5520 - 611921780.3

Displaying genes 1 – 10 of 2781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

123 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 123 metabolites

Health Effects

No health effects information available for this bacterium.