Agrobacterium pusense strain CCGM11

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium pusense strain CCGM11 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genomic data for this strain can be accessed through the accession number MAPG00000000.1. In terms of ecological significance, Agrobacterium species are known for their roles in plant interactions, particularly in the context of plant pathogens and symbionts. Although specific ecological roles of strain CCGM11 are not detailed, members of the Agrobacterium genus typically possess the ability to transfer genetic material to plant cells, which can lead to tumor formation and other plant diseases. This trait underscores the potential impact of Agrobacterium pusense strain CCGM11 on agricultural systems and plant health. Moreover, the presence of flagella in this strain suggests that it may be well-adapted to its environment, allowing for movement toward nutrient sources or away from unfavorable conditions. Understanding the characteristics of Agrobacterium pusense strain CCGM11 may enhance our knowledge of microbial interactions in the soil and their implications for plant ecology and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium pusense
Strainstrain CCGM11

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium pusense strain CCGM11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil; rhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium pusense strain CCGM11 contig_99, whole genome

Gene Summary

Adenine Count

1168014 bp

Thymine Count

1174726 bp

Guanine Count

1703334 bp

Cytosine Count

1709224 bp

Genome Length

5755320 bp

Protein-coding Genes

5084 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorBA725_06775Not AvailableNegative419767 - 42067533257.8
catalase/peroxidase hpiBA725_06780Not AvailablePositive420881 - 42294774908.9
arac family transcriptional regulatorBA725_06785Not AvailablePositive423581 - 42445632240.7
ligand-gated channelBA725_06790Not AvailableNegative424584 - 42650470401.9
hypothetical proteinBA725_00860Not AvailableNegative427171 - 42752613269.5
hypothetical proteinBA725_00865Not AvailableNegative427529 - 42857837415.0
ferrochelataseBA725_00870Not AvailableNegative428636 - 42967039394.4
multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidaseBA725_00875Not AvailableNegative430024 - 43194067110.7
hypothetical proteinBA725_00880Not AvailableNegative432158 - 43253213084.3
homospermidine synthaseBA725_00885Not AvailableNegative432679 - 43412453730.9

Displaying genes 501 – 510 of 5229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.