Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CCGM11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168014 bp
Thymine Count
1174726 bp
Guanine Count
1703334 bp
Cytosine Count
1709224 bp
Genome Length
5755320 bp
Protein-coding Genes
5084 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | BA725_06010 | Not Available | Positive | 236892 - 237224 | 11444.2 |
| conjugal transfer protein | BA725_06015 | Not Available | Positive | 237224 - 237505 | 9758.05 |
| conjugal transfer protein trbe | BA725_06020 | Not Available | Positive | 237517 - 239970 | 89669.5 |
| p-type conjugative transfer protein trbj | BA725_06025 | Not Available | Positive | 239967 - 240737 | 27511.6 |
| p-type conjugative transfer protein trbl | BA725_06030 | Not Available | Positive | 241132 - 242487 | 44804.1 |
| conjugal transfer protein trbf | BA725_06035 | Not Available | Positive | 242487 - 243170 | 25566.4 |
| p-type conjugative transfer protein trbg | BA725_06040 | Not Available | Positive | 243167 - 244216 | 38176.7 |
| conjugal transfer protein trai | BA725_06045 | Not Available | Positive | 244278 - 245438 | 40613.3 |
| hypothetical protein | BA725_06050 | Not Available | Positive | 245441 - 245677 | 8625.52 |
| lysr family transcriptional regulator | BA725_06055 | Not Available | Negative | 245674 - 246576 | 32944.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

