Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CCGM11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168014 bp
Thymine Count
1174726 bp
Guanine Count
1703334 bp
Cytosine Count
1709224 bp
Genome Length
5755320 bp
Protein-coding Genes
5084 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | BA725_05935 | Not Available | Positive | 226901 - 227185 | 10108.0 |
| repa replication protein | BA725_05940 | Not Available | Positive | 227199 - 228086 | 33722.5 |
| hypothetical protein | BA725_05955 | Not Available | Positive | 228927 - 229181 | 9269.02 |
| glycosidase | BA725_05960 | Not Available | Positive | 229178 - 229699 | 19823.1 |
| hypothetical protein | BA725_05975 | Not Available | Positive | 230282 - 230629 | 12871.0 |
| lytic transglycosylase | BA725_05980 | Not Available | Positive | 230633 - 231394 | 26586.8 |
| type vi secretion protein | BA725_05985 | Not Available | Positive | 231639 - 233226 | 58804.4 |
| conjugal transfer protein trag | BA725_05995 | Not Available | Positive | 233373 - 235358 | 73533.2 |
| copg family transcriptional regulator | BA725_06000 | Not Available | Positive | 235368 - 235732 | 13580.5 |
| p-type conjugative transfer atpase trbb | BA725_06005 | Not Available | Positive | 235912 - 236892 | 34487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

