Helicobacter sp. CLO-3 strain HMC1

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter sp. CLO-3 strain HMC1 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its genetic stability and adaptability within its ecological niche. The genome of this strain is cataloged under the accession number MAMQ00000000.1, which allows for further study and comparison with other strains within the Helicobacter genus. The specific ecological roles and interactions of Helicobacter sp. CLO-3 strain HMC1 are not detailed in the provided data; however, members of the Helicobacter genus are commonly associated with gastrointestinal environments, particularly in mammals. Their presence can influence gut health and disease dynamics. Understanding the genomic structure, such as the presence of a single replicon, can provide insights into the organism's evolutionary strategies and potential metabolic pathways. This trait may also reflect the strain's adaptation mechanisms to its environment, which can be critical in understanding its role in microbial communities. In summary, Helicobacter sp. CLO-3 strain HMC1, with its single replicon and designated genomic accession, stands as a representative of the Helicobacter genus, highlighting the importance of genomic traits in ecological interactions and evolutionary processes within microbial habitats.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter sp. CLO-3
Strainstrain HMC1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter sp. CLO-3 strain HMC1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter sp. CLO-3 strain HMC1 NODE_9, whole genome shotgun

Gene Summary

Adenine Count

614350 bp

Thymine Count

615937 bp

Guanine Count

504651 bp

Cytosine Count

510308 bp

Genome Length

2245396 bp

Protein-coding Genes

146 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBA723_02100Not AvailableNegative60561 - 6294887669.8
hypothetical proteinBA723_02105Not AvailableNegative63098 - 6340611455.8
trna (adenosine(37)-n6)-dimethylallyltransferase miaaBA723_02110Not AvailableNegative63737 - 6485241247.6
cell division protein ftswBA723_02115Not AvailableNegative64876 - 6606043507.9
hypothetical proteinBA723_02120Not AvailablePositive66495 - 6711522893.6
hypothetical proteinBA723_02125Not AvailableNegative67327 - 6882056217.1
hypothetical proteinBA723_02130Not AvailableNegative68901 - 7009745041.8
rna polymerase sigma factor rpodBA723_02135Not AvailablePositive70726 - 7260072251.0
hypothetical proteinBA723_02140Not AvailableNegative73082 - 7462655117.2
hypothetical proteinBA723_02145Not AvailablePositive74833 - 7564830197.3

Displaying genes 51 – 60 of 147 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.