Vibrio lentus strain 5F79

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio lentus strain 5F79 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication mechanisms. This trait may influence its adaptability and survival in various environments. The strain is cataloged under the accession number MAKA00000000.1, which provides a reference for researchers seeking to access its genomic data. As a member of the Vibrio genus, V. lentus is likely to share common ecological roles with other Vibrio species, particularly in marine environments. Members of this genus are often involved in nutrient cycling and can impact aquatic ecosystems. Their presence in diverse habitats can indicate the health of marine environments, and their interactions with other microorganisms may contribute to the overall microbial community structure. This single-replicon characteristic may also have implications for the strain's metabolic capabilities and potential interactions with other species. Understanding the genomic features of Vibrio lentus strain 5F79 can lead to insights into its ecological role and its potential applications in biotechnology or environmental monitoring. The study of such strains can enhance our comprehension of microbial dynamics in marine settings, particularly as they relate to environmental changes and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio lentus
Strainstrain 5F79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio lentus strain 5F79
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio lentus strain 5F79 5F79_contig_98, whole genome shotgun

Gene Summary

Adenine Count

1455069 bp

Thymine Count

1447151 bp

Guanine Count

1131557 bp

Cytosine Count

1139569 bp

Genome Length

5173686 bp

Protein-coding Genes

4409 genes

Non-Coding Genes

27 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit betaA6E08_00865Not AvailableNegative4964118 - 496521840489.4
chromosomal replication initiation protein dnaaA6E08_00870Not AvailableNegative4965300 - 496672153683.1
amino acid abc transporter substrate-binding proteinA6E08_00875Not AvailablePositive4967031 - 496778027378.4
abc transporter permeaseA6E08_00880Not AvailablePositive4967910 - 496858124995.5
amino acid abc transporter atp-binding proteinA6E08_00885Not AvailablePositive4968578 - 496931527120.8
50s ribosomal protein l34A6E08_00890Not AvailablePositive4969522 - 49696565182.54
ribonuclease p protein componentA6E08_00895Not AvailablePositive4969702 - 497002512422.1
membrane protein insertase yidcA6E08_00900Not AvailablePositive4970252 - 497187160256.8
trna uridine(34) 5-carboxymethylaminomethyl synthesis gtpase mnmeA6E08_00905Not AvailablePositive4972001 - 497336249353.7
fmn-binding protein miocA6E08_00910Not AvailablePositive4973411 - 497384515680.0

Displaying genes 4271 – 4280 of 4436 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.