Vibrio lentus strain 5F79

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio lentus strain 5F79 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication mechanisms. This trait may influence its adaptability and survival in various environments. The strain is cataloged under the accession number MAKA00000000.1, which provides a reference for researchers seeking to access its genomic data. As a member of the Vibrio genus, V. lentus is likely to share common ecological roles with other Vibrio species, particularly in marine environments. Members of this genus are often involved in nutrient cycling and can impact aquatic ecosystems. Their presence in diverse habitats can indicate the health of marine environments, and their interactions with other microorganisms may contribute to the overall microbial community structure. This single-replicon characteristic may also have implications for the strain's metabolic capabilities and potential interactions with other species. Understanding the genomic features of Vibrio lentus strain 5F79 can lead to insights into its ecological role and its potential applications in biotechnology or environmental monitoring. The study of such strains can enhance our comprehension of microbial dynamics in marine settings, particularly as they relate to environmental changes and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio lentus
Strainstrain 5F79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio lentus strain 5F79
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio lentus strain 5F79 5F79_contig_98, whole genome shotgun

Gene Summary

Adenine Count

1455069 bp

Thymine Count

1447151 bp

Guanine Count

1131557 bp

Cytosine Count

1139569 bp

Genome Length

5173686 bp

Protein-coding Genes

4409 genes

Non-Coding Genes

27 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron abc transporter substrate-binding proteinA6E08_21375Not AvailablePositive3045897 - 304691037492.6
iron abc transporter permeaseA6E08_21380Not AvailablePositive3047157 - 304878260528.5
abc transporterA6E08_21385Not AvailablePositive3048782 - 304981037721.3
phosphonomutaseA6E08_21390Not AvailableNegative3049947 - 305122347179.4
16s rrna (cytidine(1402)-2'-o)-methyltransferaseA6E08_04735Not AvailableNegative3052128 - 305299431900.4
penicillin-binding proteinA6E08_04740Not AvailablePositive3053056 - 305487368263.9
yran family proteinA6E08_04745Not AvailablePositive3054860 - 305525815097.3
phosphoheptose isomeraseA6E08_04750Not AvailablePositive3055261 - 305585121171.4
hemolysinA6E08_04755Not AvailablePositive3055868 - 305647321780.9
clpxp protease specificity-enhancing factorA6E08_04760Not AvailableNegative3056614 - 305710818199.4

Displaying genes 2591 – 2600 of 4436 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.