Vibrio genomosp. F10 strain 9CSC122

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio genomosp. F10 strain 9CSC122 is characterized by having a single replicon, which is indicative of its genomic organization. The complete genomic sequence is available under the accession number MAJZ00000000.1. This strain belongs to the genus Vibrio, which is known for its diverse ecological roles, particularly in marine environments. Vibrio species are commonly associated with aquatic habitats, where they play essential roles in nutrient cycling and as part of the microbial community. The presence of a single replicon may suggest a streamlined genomic structure, which could be advantageous for adaptation to specific environmental conditions. Such genomic features can influence the strain's metabolic capabilities and interactions with other microorganisms in its habitat. Understanding the genomic characteristics of Vibrio genomosp. F10 strain 9CSC122 provides insights into its ecological roles and potential applications. As members of the Vibrio genus are often studied for their pathogenic potential and biotechnological applications, examining the traits of this particular strain may reveal important information about its behavior in natural ecosystems and its interactions with marine organisms. Further research into its genomic features could enhance our comprehension of the ecological dynamics of Vibrio species in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio genomosp. F10
Strainstrain 9CSC122

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio genomosp. F10 strain 9CSC122
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio genomosp. F10 strain 9CSC122


Gene Summary

Adenine Count

1067240 bp

Thymine Count

1069274 bp

Guanine Count

840725 bp

Cytosine Count

845084 bp

Genome Length

3823015 bp

Protein-coding Genes

3194 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylglycinamide formyltransferase 2A6E14_03745A7MVH5Positive12053 - 1322842826.1
thiopurine s-methyltransferaseA6E14_03750Q87Q54Negative13414 - 1406424700.3
phosphoribosylglycinamide formyltransferaseA6E14_03755Not AvailablePositive14374 - 1514729104.9
23s rrna methyltransferaseA6E14_03760Q87P89Positive15375 - 1656844382.9
coenzyme a pyrophosphataseA6E14_16665A4WBH1Positive18119 - 1877225051.3
transporterA6E14_16670Not AvailableNegative18898 - 1986934956.6
hypothetical proteinA6E14_16675Not AvailableNegative20079 - 2047115190.6
manganese-dependent inorganic pyrophosphataseA6E14_16680A0B5R0Negative20555 - 2146033158.9
camphor resistance protein crcbA6E14_16685Q87KE9Negative21523 - 2184011238.8
reactive intermediate/imine deaminaseA6E14_03770P44839Positive22693 - 2301211417.6

Displaying genes 11 – 20 of 3210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

184 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 184 metabolites

Health Effects

No health effects information available for this bacterium.