Clostridium beijerinckii strain DSM 53

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii strain DSM 53 is a Gram-positive, rod-shaped bacterium characterized as a chemoorganotroph, indicating its reliance on organic compounds for energy. This strain is classified as an anaerobe, thriving in environments devoid of oxygen. It exhibits mobility, facilitated by the presence of flagella, and typically exists in singles or pairs. This microorganism inhabits fresh water and soil, reflecting its adaptability to diverse ecological niches. The mesophilic nature of C. beijerinckii DSM 53 suggests an optimal growth temperature range typically between 20°C and 45°C, which aligns with many terrestrial and aquatic environments. Notably, C. beijerinckii DSM 53 has a single replicon and one membrane structure. Its free-living biotic relationship indicates that it does not rely on other organisms for survival, allowing it to play a role in nutrient cycling within its habitats. The strain is cataloged under the accession number LZZI00000000.1. The ecological significance of Clostridium beijerinckii strain DSM 53 lies in its potential contributions to the decomposition of organic matter in anaerobic environments. By breaking down complex organic materials, it aids in nutrient recycling and may influence soil and water quality, underscoring the importance of such microorganisms in maintaining ecosystem health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
Strainstrain DSM 53

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii strain DSM 53
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium beijerinckii strain DSM 53 CLBCK_contig000346, whole

Gene Summary

Adenine Count

2023829 bp

Thymine Count

2043937 bp

Guanine Count

843116 bp

Cytosine Count

862365 bp

Genome Length

5773247 bp

Protein-coding Genes

4972 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate diacid transcriptional activator cdarCLBCK_29390Not AvailablePositive3268234 - 326938844846.1
transposon tn10 tetd proteinCLBCK_29400Not AvailablePositive3269463 - 327031133230.9
d-amino acid dehydrogenase small subunitCLBCK_29410Not AvailablePositive3270336 - 327130436458.3
taurine--pyruvate aminotransferaseCLBCK_29420Not AvailablePositive3271680 - 327300549066.0
alcohol dehydrogenaseCLBCK_29430Not AvailablePositive3273019 - 327417041508.1
bicarbonate transport atp-binding protein cmpcCLBCK_29440Not AvailablePositive3274243 - 327507631609.4
putative aliphatic sulfonates transport permease protein ssucCLBCK_29450Not AvailablePositive3275079 - 327585528467.9
putative aliphatic sulfonates transport permease protein ssucCLBCK_29460Not AvailablePositive3275868 - 327663527760.1
nmt1/thi5 like proteinCLBCK_29470Not AvailablePositive3276791 - 327785239077.9
d-hydantoinaseCLBCK_29480Not AvailablePositive3278093 - 327946050171.6

Displaying genes 2981 – 2990 of 5130 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.