Clostridium beijerinckii strain DSM 53

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii strain DSM 53 is a Gram-positive, rod-shaped bacterium characterized as a chemoorganotroph, indicating its reliance on organic compounds for energy. This strain is classified as an anaerobe, thriving in environments devoid of oxygen. It exhibits mobility, facilitated by the presence of flagella, and typically exists in singles or pairs. This microorganism inhabits fresh water and soil, reflecting its adaptability to diverse ecological niches. The mesophilic nature of C. beijerinckii DSM 53 suggests an optimal growth temperature range typically between 20°C and 45°C, which aligns with many terrestrial and aquatic environments. Notably, C. beijerinckii DSM 53 has a single replicon and one membrane structure. Its free-living biotic relationship indicates that it does not rely on other organisms for survival, allowing it to play a role in nutrient cycling within its habitats. The strain is cataloged under the accession number LZZI00000000.1. The ecological significance of Clostridium beijerinckii strain DSM 53 lies in its potential contributions to the decomposition of organic matter in anaerobic environments. By breaking down complex organic materials, it aids in nutrient recycling and may influence soil and water quality, underscoring the importance of such microorganisms in maintaining ecosystem health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
Strainstrain DSM 53

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii strain DSM 53
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium beijerinckii strain DSM 53 CLBCK_contig000346, whole

Gene Summary

Adenine Count

2023829 bp

Thymine Count

2043937 bp

Guanine Count

843116 bp

Cytosine Count

862365 bp

Genome Length

5773247 bp

Protein-coding Genes

4972 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative fad-linked oxidoreductase yvdpCLBCK_18180Not AvailablePositive2046178 - 204754851259.4
r-phenyllactate dehydratase activatorCLBCK_18190Not AvailablePositive2047979 - 2051932148832.0
cupin domain proteinCLBCK_18200Not AvailablePositive2051952 - 205229012002.8
hypothetical proteinCLBCK_18210Not AvailablePositive2052295 - 205263012832.4
tyrosine recombinase xercCLBCK_18220Not AvailableNegative2053278 - 205380220781.5
Trna-serNot AvailableNot AvailablePositive2053924 - 2054013Not Available
cyclopropane-fatty-acyl-phospholipid synthaseCLBCK_18240Not AvailableNegative2054300 - 205547545145.0
hth-type transcriptional regulator lutrCLBCK_18250Not AvailableNegative2055558 - 205622925217.5
hypothetical proteinCLBCK_18260Not AvailableNegative2056251 - 205683822856.6
inner membrane protein yohkCLBCK_18270Not AvailableNegative2056855 - 205755924872.8

Displaying genes 1951 – 1960 of 5130 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.