Clostridium beijerinckii strain ATCC 39058

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii strain ATCC 39058 is a Gram-positive, mesophilic bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This species thrives in anaerobic conditions and predominantly resides in freshwater and soil habitats. As a chemoorganotroph, it derives energy from organic compounds, making it an important player in nutrient cycling within its ecological niches. The cellular arrangement of C. beijerinckii can be observed in pairs or singles, indicating its flexible growth patterns under varying environmental conditions. It possesses a single replicon and a single membrane, which is typical of many bacteria in its genus. A notable aspect of C. beijerinckii is its free-living biotic relationship, suggesting that it does not rely on a host organism for survival or reproduction. This characteristic allows it to play a significant role in its ecosystem, particularly in the decomposition of organic matter and the recycling of nutrients. Overall, the ecological role of Clostridium beijerinckii strain ATCC 39058 as a free-living anaerobe underscores its importance in maintaining the balance of microbial communities in freshwater and soil environments. Its metabolic capabilities contribute to the breakdown of complex organic materials, facilitating nutrient availability for other organisms within these ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
Strainstrain ATCC 39058

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii strain ATCC 39058
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium beijerinckii strain ATCC 39058 CBEIJ_contig000302,

Gene Summary

Adenine Count

2117720 bp

Thymine Count

2075378 bp

Guanine Count

896045 bp

Cytosine Count

864196 bp

Genome Length

5953339 bp

Protein-coding Genes

5177 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative sensor histidine kinase tcryCBEIJ_06010Not AvailableNegative687692 - 68924859774.5
transcriptional regulatory protein yycfCBEIJ_06020Not AvailableNegative689245 - 68993425919.5
putative monooxygenase ycneCBEIJ_06030Not AvailablePositive690354 - 69063810942.1
l-serine dehydratase, alpha chainCBEIJ_06040Not AvailableNegative691093 - 69197130152.1
l-serine dehydratase, beta chainCBEIJ_06050Not AvailableNegative691973 - 69265324567.9
ferri-bacillibactin esterase besaCBEIJ_06060Not AvailableNegative692927 - 69366428998.9
virulence regulon transcriptional activator virfCBEIJ_06070Not AvailableNegative693671 - 69447431577.3
hemin transport system permease protein hmuuCBEIJ_06080Not AvailablePositive694658 - 69575238785.8
hemin import atp-binding protein hmuvCBEIJ_06090Not AvailablePositive695762 - 69655329423.9
putative abc transporter solute-binding protein yclq precursorCBEIJ_06100Not AvailablePositive696613 - 69765337244.9

Displaying genes 701 – 710 of 5310 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.