Clostridium beijerinckii strain ATCC 39058

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii strain ATCC 39058 is a Gram-positive, mesophilic bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This species thrives in anaerobic conditions and predominantly resides in freshwater and soil habitats. As a chemoorganotroph, it derives energy from organic compounds, making it an important player in nutrient cycling within its ecological niches. The cellular arrangement of C. beijerinckii can be observed in pairs or singles, indicating its flexible growth patterns under varying environmental conditions. It possesses a single replicon and a single membrane, which is typical of many bacteria in its genus. A notable aspect of C. beijerinckii is its free-living biotic relationship, suggesting that it does not rely on a host organism for survival or reproduction. This characteristic allows it to play a significant role in its ecosystem, particularly in the decomposition of organic matter and the recycling of nutrients. Overall, the ecological role of Clostridium beijerinckii strain ATCC 39058 as a free-living anaerobe underscores its importance in maintaining the balance of microbial communities in freshwater and soil environments. Its metabolic capabilities contribute to the breakdown of complex organic materials, facilitating nutrient availability for other organisms within these ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
Strainstrain ATCC 39058

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii strain ATCC 39058
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium beijerinckii strain ATCC 39058 CBEIJ_contig000302,

Gene Summary

Adenine Count

2117720 bp

Thymine Count

2075378 bp

Guanine Count

896045 bp

Cytosine Count

864196 bp

Genome Length

5953339 bp

Protein-coding Genes

5177 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis protein iiCBEIJ_13210Not AvailableNegative1531656 - 153335663113.6
putative symporter yjmbCBEIJ_13220Not AvailableNegative1533789 - 153516250385.0
beta-xylosidaseCBEIJ_13230Not AvailableNegative1535405 - 153706663307.6
dihydroxy-acid dehydrataseCBEIJ_13240Not AvailableNegative1537228 - 153896463051.2
putative 2-keto-3-deoxy-galactonate aldolase yageCBEIJ_13250Not AvailableNegative1539030 - 153991733573.8
transcriptional regulator kdgrCBEIJ_13260Not AvailableNegative1540002 - 154076928437.6
hth-type transcriptional activator mtaCBEIJ_13270Not AvailableNegative1540929 - 154208944510.4
hypothetical proteinCBEIJ_13280Not AvailablePositive1542279 - 154310030960.7
udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferaseCBEIJ_13290Not AvailableNegative1543196 - 154437144208.9
hypothetical proteinCBEIJ_13300Not AvailablePositive1544534 - 154484211122.0

Displaying genes 1421 – 1430 of 5310 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.