Erythrobacter dokdonensis DSW-74

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Erythrobacter

Description

Erythrobacter dokdonensis DSW-74 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is indicative of its genetic structure and replication mechanism. The strain is cataloged under the accession number LZYB00000000.1, providing a reference for genomic information and further research. The classification of Erythrobacter dokdonensis within the broader context of microbial diversity highlights its potential ecological roles. As a member of the Erythrobacter genus, it is likely adapted to specific environmental niches, potentially including marine or freshwater habitats, where it could contribute to processes such as organic matter degradation and nutrient cycling. Understanding the traits of Erythrobacter dokdonensis DSW-74 can provide insights into its ecological functions and interactions within its environment. Its Gram-negative nature may also confer advantages in terms of resistance to certain antibiotics, which is an important consideration in microbial ecology and biotechnology. The single replicon characteristic may reflect evolutionary adaptations that allow for efficient replication and survival in its specific ecological niche. Overall, Erythrobacter dokdonensis DSW-74 exemplifies the diverse adaptations found within microbial communities and underscores the importance of studying such organisms to gain a better understanding of their roles in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusErythrobacter
SpeciesErythrobacter dokdonensis
StrainDSW-74

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erythrobacter dokdonensis DSW-74 DSW74_contig11, whole genome

Gene Summary

Adenine Count

520433 bp

Thymine Count

533431 bp

Guanine Count

979507 bp

Cytosine Count

961783 bp

Genome Length

2995154 bp

Protein-coding Genes

2875 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidaseI603_0721Not AvailableNegative738902 - 74007741486.2
lytic murein transglycosylaseI603_0722Not AvailableNegative740128 - 74106934360.7
methyltransferaseI603_0723Not AvailableNegative741372 - 74222630153.2
dihydrolipoyl dehydrogenaseI603_0724Not AvailableNegative742237 - 74364950058.4
cytosolic long-chain acyl-coa thioester hydrolase family proteinI603_0725Not AvailableNegative743642 - 74401312525.0
pyruvate dehydrogenase e2 componentI603_0726Not AvailableNegative744054 - 74547848336.2
universal stress family proteinI603_0727Not AvailablePositive745617 - 74606915569.8
ribonuclease rI603_0728Not AvailableNegative746074 - 74835983254.2
leucine aminopeptidase-related proteinI603_0729Not AvailableNegative748558 - 74993449603.4
proline--trna ligaseI603_0730Not AvailableNegative749972 - 75151657352.6

Displaying genes 721 – 730 of 2875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.