Erythrobacter dokdonensis DSW-74

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Erythrobacter

Description

Erythrobacter dokdonensis DSW-74 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is indicative of its genetic structure and replication mechanism. The strain is cataloged under the accession number LZYB00000000.1, providing a reference for genomic information and further research. The classification of Erythrobacter dokdonensis within the broader context of microbial diversity highlights its potential ecological roles. As a member of the Erythrobacter genus, it is likely adapted to specific environmental niches, potentially including marine or freshwater habitats, where it could contribute to processes such as organic matter degradation and nutrient cycling. Understanding the traits of Erythrobacter dokdonensis DSW-74 can provide insights into its ecological functions and interactions within its environment. Its Gram-negative nature may also confer advantages in terms of resistance to certain antibiotics, which is an important consideration in microbial ecology and biotechnology. The single replicon characteristic may reflect evolutionary adaptations that allow for efficient replication and survival in its specific ecological niche. Overall, Erythrobacter dokdonensis DSW-74 exemplifies the diverse adaptations found within microbial communities and underscores the importance of studying such organisms to gain a better understanding of their roles in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusErythrobacter
SpeciesErythrobacter dokdonensis
StrainDSW-74

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erythrobacter dokdonensis DSW-74 DSW74_contig11, whole genome

Gene Summary

Adenine Count

520433 bp

Thymine Count

533431 bp

Guanine Count

979507 bp

Cytosine Count

961783 bp

Genome Length

2995154 bp

Protein-coding Genes

2875 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-recycling factorI603_0041Not AvailablePositive43309 - 4386620755.9
udp pyrophosphate synthaseI603_0042Not AvailablePositive43933 - 4457423924.6
phosphatidate cytidylyltransferaseI603_0043Not AvailablePositive44561 - 4531625897.9
1-deoxy-d-xylulose 5-phosphate reductoisomeraseI603_0044Not AvailablePositive45324 - 4648740239.6
site-2 protease, metallo peptidase, merops family m50bI603_0045Not AvailablePositive46480 - 4760740175.0
outer membrane protein assembly factor bamaI603_0046Not AvailablePositive47890 - 5053598361.2
outer membrane family proteinI603_0047Not AvailablePositive50535 - 5121824815.3
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzI603_0048Not AvailablePositive51253 - 5172617027.0
50s ribosomal protein l31I603_0049Not AvailablePositive51942 - 521668209.73
trar/dksa family transcriptional regulatorI603_0050Not AvailableNegative52238 - 5256711986.2

Displaying genes 41 – 50 of 2875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.