Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. PBVC088 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016085 bp
Thymine Count
1010363 bp
Guanine Count
1872334 bp
Cytosine Count
1883747 bp
Genome Length
5782529 bp
Protein-coding Genes
5358 genes
Non-Coding Genes
134 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | A9320_01640 | Not Available | Positive | 337086 - 337877 | 28703.2 |
| spermidine/putrescine abc transporter substrate-binding protein | A9320_01645 | Not Available | Positive | 337929 - 339065 | 41843.9 |
| abc transporter atp-binding protein | A9320_01650 | Not Available | Positive | 339135 - 340208 | 38332.1 |
| aminotransferase | A9320_01655 | Not Available | Positive | 340213 - 341550 | 48464.5 |
| 3-keto-5-aminohexanoate cleavage protein | A9320_01660 | Not Available | Positive | 341552 - 342478 | 33669.8 |
| acetyltransferase | A9320_01665 | Not Available | Positive | 342478 - 342957 | 16817.9 |
| acetylpolyamine aminohydrolase | A9320_01670 | Not Available | Positive | 342954 - 343979 | 36565.0 |
| glycerol-3-phosphate dehydrogenase | A9320_01675 | Not Available | Positive | 343976 - 345076 | 39301.7 |
| hypothetical protein | A9320_01680 | Not Available | Positive | 345092 - 345442 | 12477.9 |
| lysr family transcriptional regulator | A9320_01685 | Not Available | Negative | 345439 - 346362 | 34199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
