Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium colombiense |
| Strain | strain E1334 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902744 bp
Thymine Count
896987 bp
Guanine Count
1868182 bp
Cytosine Count
1877867 bp
Genome Length
5545780 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | A5708_04370 | P37642 | Positive | 3669130 - 3670167 | 37888.7 |
| n-acetylglucosamine-6-phosphate deacetylase | A5708_04375 | Q8XAC3 | Negative | 3670164 - 3671276 | 37823.4 |
| mfs transporter | A5708_04380 | P46333 | Negative | 3671267 - 3672619 | 47580.4 |
| d-alanyl-d-alanine carboxypeptidase | A5708_04385 | O53380 | Negative | 3672625 - 3673890 | 43183.6 |
| hypothetical protein | A5708_04390 | Not Available | Positive | 3674096 - 3674362 | 9503.43 |
| strictosidine synthase | A5708_04395 | Not Available | Negative | 3674369 - 3675373 | 35496.5 |
| hypothetical protein | A5708_04400 | O53379 | Negative | 3675384 - 3676727 | 48468.6 |
| rna polymerase subunit sigma | A5708_04405 | Not Available | Positive | 3676754 - 3677665 | 32464.7 |
| transposase | A5708_04410 | Not Available | Negative | 3677637 - 3678245 | 22408.8 |
| succinate dehydrogenase iron-sulfur subunit | A5708_04415 | P07014 | Negative | 3678762 - 3679574 | 30052.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


