Mycobacterium scrofulaceum strain E2838

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium scrofulaceum strain E2838 is a rod-shaped bacterium notable for its ability to cause mycobacterial diseases in its hosts, primarily Homo sapiens and other Metazoa. This strain is characterized by its single replicon and the presence of flagella, which may contribute to its motility and interaction with host environments. M. scrofulaceum is closely associated with conditions such as lymphadenitis and other mycobacterial infections, highlighting its significance in the field of microbiology and public health. The strain's ability to inhabit both human and non-human metazoan hosts suggests a degree of adaptability, which could have implications for understanding transmission dynamics and host-pathogen interactions. The accession number for this strain is LZJY00000000.1, which provides a reference point for further genetic and genomic studies. Understanding the genetic makeup and pathogenic mechanisms of M. scrofulaceum strain E2838 could offer valuable insights into the prevention and treatment of diseases caused by this and related mycobacterial species. The ecological role of this bacterium, particularly its interactions and impacts on host health, underscores the importance of continued research into mycobacterial pathogens and their effects on both human and animal populations.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium scrofulaceum
Strainstrain E2838

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium scrofulaceum strain E2838


Gene Summary

Adenine Count

892812 bp

Thymine Count

893001 bp

Guanine Count

1931993 bp

Cytosine Count

1933105 bp

Genome Length

5650911 bp

Protein-coding Genes

4967 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive2371 - 3906Not Available
valine--trna ligaseA5679_00010Q73XN8Negative557 - 321498529.4
23s ribosomal rnaNot AvailableNot AvailablePositive4184 - 7292Not Available
enoyl-acp reductaseA5679_00015O53176Negative3280 - 453644532.9
hypothetical proteinA5679_00020O53177Negative4610 - 505614972.5
molybdenum cofactor guanylyltransferaseA5679_00025P65403Negative6040 - 664521150.5
5s ribosomal rnaNot AvailableNot AvailablePositive7380 - 7492Not Available
2-oxoacid:ferredoxin oxidoreductase subunit betaA5679_00030O53181Negative6647 - 773839500.5
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive8475 - 8875Not Available
2-oxoglutarate ferredoxin oxidoreductase subunit alphaA5679_00035O53182Negative7735 - 972970399.9

Displaying genes 1 – 10 of 5020 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

472 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 472 metabolites

Health Effects

Health ConditionRelationReference
Mycobacterial diseasesCausesPMC5276850

Displaying health effects 1 – 1 of 1 in total