Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium scrofulaceum |
| Strain | strain E2838 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892812 bp
Thymine Count
893001 bp
Guanine Count
1931993 bp
Cytosine Count
1933105 bp
Genome Length
5650911 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase, nadp-dependent | A5679_12165 | P16100 | Positive | 1352863 - 1355100 | 82972.8 |
| isocitrate dehydrogenase | A5679_12170 | P65098 | Positive | 1355133 - 1356359 | 45758.6 |
| hydrolase | A5679_12175 | Not Available | Negative | 1356352 - 1357149 | 29185.1 |
| polyketide synthase | A5679_12190 | O53901 | Negative | 1361636 - 1367878 | 219493.0 |
| n-acetylmuramoyl-l-alanine amidase | A5679_12195 | I6Y4D2 | Negative | 1368433 - 1369170 | 25383.9 |
| nucleoid-associated protein | A5679_12200 | Q744M4 | Positive | 1369305 - 1369646 | 11480.9 |
| recombination protein recr | A5679_12205 | A0Q9T5 | Positive | 1369657 - 1370268 | 22076.6 |
| hypothetical protein | A5679_12210 | P9WM46 | Negative | 1370388 - 1371002 | 21455.9 |
| glutamine amidotransferase | A5679_12215 | Q8DNZ8 | Negative | 1371123 - 1371830 | 24670.9 |
| udp-n-acetylmuramyl peptide synthase | A5679_12220 | Not Available | Negative | 1371823 - 1373052 | 42858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


