Vibrio sp. UCD-FRSSP16_10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. UCD-FRSSP16_10 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of many Vibrio species. The accession number for this strain is LZFX00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. While specific phenotypic traits and ecological roles of Vibrio sp. UCD-FRSSP16_10 are not detailed in the provided data, Vibrio species are generally known to inhabit marine environments and are often associated with various ecological interactions, including those with marine organisms and in nutrient cycling. The single replicon trait may suggest an adaptation to specific environmental conditions, allowing for efficient replication and resource utilization. Understanding the genomic characteristics of Vibrio sp. UCD-FRSSP16_10 could provide insights into its ecological niche and potential interactions within marine ecosystems. Further investigation into its metabolic capabilities and ecological roles could enhance our knowledge of its contribution to marine biodiversity and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. UCD-FRSSP16_10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. UCD-FRSSP16_10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. UCD-FRSSP16_10 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

1050788 bp

Thymine Count

1035409 bp

Guanine Count

743775 bp

Cytosine Count

763929 bp

Genome Length

3593963 bp

Protein-coding Genes

3067 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iA9264_04185Not AvailableNegative2382668 - 2385493103942.0
acetyltransferaseA9264_04190Not AvailableNegative2385829 - 238627516978.4
delta-aminolevulinic acid dehydrataseA9264_04195Not AvailableNegative2386390 - 238740337493.2
hydrolase tatdA9264_04200Not AvailablePositive2387532 - 238829328761.3
twin arginine-targeting protein translocase tatcA9264_04205Not AvailableNegative2388366 - 238912127896.8
twin arginine-targeting protein translocase tatbA9264_04210Not AvailableNegative2389168 - 238950912651.2
preprotein translocase subunit tataA9264_04215Not AvailableNegative2389513 - 23897709228.17
ubiquinone biosynthesis regulatory protein kinase ubibA9264_04220Not AvailableNegative2389798 - 239143562797.5
hypothetical proteinA9264_04225Not AvailableNegative2391432 - 239203722241.0
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseA9264_04230Not AvailableNegative2392050 - 239282328745.4

Displaying genes 2141 – 2150 of 3183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.